Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LtbrP50284 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LtbrP50284 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.96■□□□□ 0.95
LtbrP50284 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LtbrP50284 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LtbrP50284 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LtbrP50284 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.95■□□□□ 0.94
LtbrP50284 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LtbrP50284 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LtbrP50284 Gm25016-201ENSMUST00000158399 131 ntBASIC20.95■□□□□ 0.94
LtbrP50284 Gm22697-201ENSMUST00000175194 63 ntBASIC20.95■□□□□ 0.94
LtbrP50284 Gm28033-201ENSMUST00000184224 96 ntBASIC20.95■□□□□ 0.94
LtbrP50284 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.95■□□□□ 0.94
LtbrP50284 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LtbrP50284 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LtbrP50284 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LtbrP50284 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LtbrP50284 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LtbrP50284 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LtbrP50284 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LtbrP50284 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.93■□□□□ 0.94
LtbrP50284 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LtbrP50284 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.93■□□□□ 0.94
LtbrP50284 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LtbrP50284 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LtbrP50284 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LtbrP50284 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LtbrP50284 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LtbrP50284 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LtbrP50284 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.92■□□□□ 0.94
LtbrP50284 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LtbrP50284 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LtbrP50284 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LtbrP50284 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
LtbrP50284 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LtbrP50284 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.91■□□□□ 0.94
LtbrP50284 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
LtbrP50284 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LtbrP50284 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LtbrP50284 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LtbrP50284 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LtbrP50284 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LtbrP50284 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LtbrP50284 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.9■□□□□ 0.94
LtbrP50284 Gm2274-201ENSMUST00000184539 609 ntBASIC20.9■□□□□ 0.94
LtbrP50284 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.9■□□□□ 0.94
LtbrP50284 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LtbrP50284 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LtbrP50284 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.89■□□□□ 0.94
LtbrP50284 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LtbrP50284 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LtbrP50284 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LtbrP50284 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LtbrP50284 Gm27704-201ENSMUST00000185094 107 ntBASIC20.89■□□□□ 0.93
LtbrP50284 Gm38285-201ENSMUST00000192928 922 ntBASIC20.89■□□□□ 0.93
LtbrP50284 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Gm5867-201ENSMUST00000063197 592 ntBASIC20.89■□□□□ 0.93
LtbrP50284 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.89■□□□□ 0.93
LtbrP50284 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.89■□□□□ 0.93
LtbrP50284 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LtbrP50284 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LtbrP50284 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.88■□□□□ 0.93
LtbrP50284 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.88■□□□□ 0.93
LtbrP50284 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LtbrP50284 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LtbrP50284 Gm7153-201ENSMUST00000117092 455 ntBASIC20.88■□□□□ 0.93
LtbrP50284 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.88■□□□□ 0.93
LtbrP50284 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms