Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hnf4aP49698 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.26■□□□□ 0.35
Hnf4aP49698 Gm2399-201ENSMUST00000104944 225 ntBASIC17.26■□□□□ 0.35
Hnf4aP49698 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Rab3c-203ENSMUST00000224180 967 ntBASIC17.26■□□□□ 0.35
Hnf4aP49698 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hnf4aP49698 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.26■□□□□ 0.35
Hnf4aP49698 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hnf4aP49698 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.26■□□□□ 0.35
Hnf4aP49698 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hnf4aP49698 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Hnf4aP49698 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hnf4aP49698 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.25■□□□□ 0.35
Hnf4aP49698 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.25■□□□□ 0.35
Hnf4aP49698 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hnf4aP49698 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hnf4aP49698 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.24■□□□□ 0.35
Hnf4aP49698 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.24■□□□□ 0.35
Hnf4aP49698 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Hnf4aP49698 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hnf4aP49698 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.23■□□□□ 0.35
Hnf4aP49698 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hnf4aP49698 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hnf4aP49698 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hnf4aP49698 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.23■□□□□ 0.35
Hnf4aP49698 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hnf4aP49698 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hnf4aP49698 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Hnf4aP49698 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hnf4aP49698 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hnf4aP49698 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Gm38285-201ENSMUST00000192928 922 ntBASIC17.22■□□□□ 0.35
Hnf4aP49698 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.22■□□□□ 0.35
Hnf4aP49698 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hnf4aP49698 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hnf4aP49698 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hnf4aP49698 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hnf4aP49698 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hnf4aP49698 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hnf4aP49698 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms