Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Xcl1P47993 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Xcl1P47993 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Xcl1P47993 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Xcl1P47993 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.7□□□□□ -0.54
Xcl1P47993 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC11.7□□□□□ -0.54
Xcl1P47993 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.7□□□□□ -0.54
Xcl1P47993 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Xcl1P47993 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Xcl1P47993 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Xcl1P47993 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Xcl1P47993 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.69□□□□□ -0.54
Xcl1P47993 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Xcl1P47993 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.68□□□□□ -0.54
Xcl1P47993 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Xcl1P47993 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Xcl1P47993 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Xcl1P47993 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Xcl1P47993 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.68□□□□□ -0.54
Xcl1P47993 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Xcl1P47993 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms