Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Rph3aP47708 Gm38285-201ENSMUST00000192928 922 ntBASIC17.16■□□□□ 0.34
Rph3aP47708 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Zfp783-201ENSMUST00000095946 670 ntBASIC17.16■□□□□ 0.34
Rph3aP47708 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.16■□□□□ 0.34
Rph3aP47708 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rph3aP47708 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Fst-202ENSMUST00000223640 2612 ntBASIC17.16■□□□□ 0.34
Rph3aP47708 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rph3aP47708 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rph3aP47708 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rph3aP47708 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rph3aP47708 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.15■□□□□ 0.34
Rph3aP47708 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.15■□□□□ 0.34
Rph3aP47708 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.15■□□□□ 0.34
Rph3aP47708 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rph3aP47708 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.15■□□□□ 0.34
Rph3aP47708 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rph3aP47708 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.15■□□□□ 0.34
Rph3aP47708 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rph3aP47708 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.15■□□□□ 0.34
Rph3aP47708 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rph3aP47708 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rph3aP47708 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.14■□□□□ 0.33
Rph3aP47708 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.14■□□□□ 0.33
Rph3aP47708 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rph3aP47708 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rph3aP47708 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Dio3-201ENSMUST00000097228 1449 ntBASIC17.13■□□□□ 0.33
Rph3aP47708 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rph3aP47708 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Rph3aP47708 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.13■□□□□ 0.33
Rph3aP47708 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Rph3aP47708 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rph3aP47708 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.13■□□□□ 0.33
Rph3aP47708 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rph3aP47708 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Rph3aP47708 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Rph3aP47708 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.12■□□□□ 0.33
Rph3aP47708 Gm20049-201ENSMUST00000219950 730 ntBASIC17.12■□□□□ 0.33
Rph3aP47708 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rph3aP47708 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rph3aP47708 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rph3aP47708 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rph3aP47708 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.11■□□□□ 0.33
Rph3aP47708 Gm12896-201ENSMUST00000118430 226 ntBASIC17.11■□□□□ 0.33
Rph3aP47708 Gm11927-201ENSMUST00000118472 759 ntBASIC17.11■□□□□ 0.33
Rph3aP47708 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.11■□□□□ 0.33
Rph3aP47708 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.11■□□□□ 0.33
Rph3aP47708 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rph3aP47708 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.11■□□□□ 0.33
Rph3aP47708 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rph3aP47708 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms