Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Vps4bP46467 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.07■□□□□ 0.48
Vps4bP46467 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps4bP46467 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps4bP46467 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.06■□□□□ 0.48
Vps4bP46467 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vps4bP46467 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.06■□□□□ 0.48
Vps4bP46467 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Vps4bP46467 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps4bP46467 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps4bP46467 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.05■□□□□ 0.48
Vps4bP46467 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps4bP46467 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Vps4bP46467 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps4bP46467 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Gm7290-201ENSMUST00000104990 617 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.04■□□□□ 0.48
Vps4bP46467 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps4bP46467 Gm12918-201ENSMUST00000120234 636 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Gm15710-201ENSMUST00000121821 636 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.04■□□□□ 0.48
Vps4bP46467 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Gm5075-201ENSMUST00000196916 622 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.04■□□□□ 0.48
Vps4bP46467 Gm6365-201ENSMUST00000054711 744 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vps4bP46467 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps4bP46467 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps4bP46467 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.04■□□□□ 0.48
Vps4bP46467 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.03■□□□□ 0.48
Vps4bP46467 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps4bP46467 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Vps4bP46467 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.02■□□□□ 0.48
Vps4bP46467 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps4bP46467 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Vps4bP46467 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.02■□□□□ 0.47
Vps4bP46467 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps4bP46467 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.02■□□□□ 0.47
Vps4bP46467 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps4bP46467 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Vps4bP46467 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Vps4bP46467 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.01■□□□□ 0.47
Vps4bP46467 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps4bP46467 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps4bP46467 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Vps4bP46467 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps4bP46467 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Vps4bP46467 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms