Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.99■□□□□ 0.79
Sdc2P43407 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.99■□□□□ 0.79
Sdc2P43407 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sdc2P43407 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.99■□□□□ 0.79
Sdc2P43407 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc2P43407 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Sdc2P43407 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Sdc2P43407 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.98■□□□□ 0.79
Sdc2P43407 Gm26571-201ENSMUST00000181399 666 ntBASIC19.98■□□□□ 0.79
Sdc2P43407 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sdc2P43407 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc2P43407 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Sdc2P43407 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.97■□□□□ 0.79
Sdc2P43407 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc2P43407 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Sdc2P43407 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Sdc2P43407 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.96■□□□□ 0.79
Sdc2P43407 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.96■□□□□ 0.79
Sdc2P43407 Gm8969-201ENSMUST00000199694 526 ntBASIC19.96■□□□□ 0.79
Sdc2P43407 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc2P43407 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sdc2P43407 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc2P43407 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc2P43407 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Sdc2P43407 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.95■□□□□ 0.78
Sdc2P43407 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc2P43407 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.95■□□□□ 0.78
Sdc2P43407 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc2P43407 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sdc2P43407 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.95■□□□□ 0.78
Sdc2P43407 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sdc2P43407 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.94■□□□□ 0.78
Sdc2P43407 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sdc2P43407 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.94■□□□□ 0.78
Sdc2P43407 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sdc2P43407 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sdc2P43407 Gm7291-201ENSMUST00000199147 382 ntBASIC19.94■□□□□ 0.78
Sdc2P43407 Idnk-204ENSMUST00000226010 1898 ntBASIC19.94■□□□□ 0.78
Sdc2P43407 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.94■□□□□ 0.78
Sdc2P43407 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sdc2P43407 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.94■□□□□ 0.78
Sdc2P43407 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc2P43407 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc2P43407 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc2P43407 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc2P43407 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.93■□□□□ 0.78
Sdc2P43407 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Gm10849-201ENSMUST00000100397 618 ntBASIC19.93■□□□□ 0.78
Sdc2P43407 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.93■□□□□ 0.78
Sdc2P43407 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc2P43407 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc2P43407 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms