Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Gm15375-201ENSMUST00000119510 849 ntBASIC16.35■□□□□ 0.21
Nkx2-2P42586 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.35■□□□□ 0.21
Nkx2-2P42586 Gm37856-201ENSMUST00000191634 999 ntBASIC16.35■□□□□ 0.21
Nkx2-2P42586 Gm8969-201ENSMUST00000199694 526 ntBASIC16.35■□□□□ 0.21
Nkx2-2P42586 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Gm29791-202ENSMUST00000207888 369 ntBASIC16.35■□□□□ 0.21
Nkx2-2P42586 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-2P42586 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-2P42586 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-2P42586 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Nkx2-2P42586 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-2P42586 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.33■□□□□ 0.21
Nkx2-2P42586 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.33■□□□□ 0.2
Nkx2-2P42586 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-2P42586 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-2P42586 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.32■□□□□ 0.2
Nkx2-2P42586 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Trmt13-210ENSMUST00000198454 880 ntBASIC16.32■□□□□ 0.2
Nkx2-2P42586 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.32■□□□□ 0.2
Nkx2-2P42586 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-2P42586 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-2P42586 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Gm11643-201ENSMUST00000119578 864 ntBASIC16.3■□□□□ 0.2
Nkx2-2P42586 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-2P42586 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms