Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cxcl12P40224 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.4■□□□□ 0.54
Cxcl12P40224 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cxcl12P40224 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.4■□□□□ 0.54
Cxcl12P40224 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Gm27742-201ENSMUST00000184667 60 ntBASIC18.4■□□□□ 0.54
Cxcl12P40224 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cxcl12P40224 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cxcl12P40224 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.39■□□□□ 0.53
Cxcl12P40224 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cxcl12P40224 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl12P40224 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Gm6623-201ENSMUST00000173570 544 ntBASIC18.38■□□□□ 0.53
Cxcl12P40224 Gm28659-201ENSMUST00000188013 759 ntBASIC18.38■□□□□ 0.53
Cxcl12P40224 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.38■□□□□ 0.53
Cxcl12P40224 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl12P40224 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.37■□□□□ 0.53
Cxcl12P40224 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cxcl12P40224 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Cxcl12P40224 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.37■□□□□ 0.53
Cxcl12P40224 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl12P40224 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl12P40224 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.37■□□□□ 0.53
Cxcl12P40224 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl12P40224 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cxcl12P40224 Gm26039-201ENSMUST00000158152 144 ntBASIC18.36■□□□□ 0.53
Cxcl12P40224 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.36■□□□□ 0.53
Cxcl12P40224 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl12P40224 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl12P40224 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl12P40224 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cxcl12P40224 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.35■□□□□ 0.53
Cxcl12P40224 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cxcl12P40224 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.35■□□□□ 0.53
Cxcl12P40224 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Cxcl12P40224 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl12P40224 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.34■□□□□ 0.53
Cxcl12P40224 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.34■□□□□ 0.53
Cxcl12P40224 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Cxcl12P40224 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.34■□□□□ 0.53
Cxcl12P40224 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cxcl12P40224 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.34■□□□□ 0.53
Cxcl12P40224 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.34■□□□□ 0.53
Cxcl12P40224 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl12P40224 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms