Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh4P39038 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdh4P39038 Gm10138-203ENSMUST00000206952 366 ntBASIC17.04■□□□□ 0.32
Cdh4P39038 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh4P39038 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh4P39038 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh4P39038 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdh4P39038 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cdh4P39038 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cdh4P39038 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.04■□□□□ 0.32
Cdh4P39038 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdh4P39038 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdh4P39038 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh4P39038 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Gm22240-201ENSMUST00000175225 82 ntBASIC17.03■□□□□ 0.32
Cdh4P39038 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh4P39038 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh4P39038 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cdh4P39038 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Cdh4P39038 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Cdh4P39038 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdh4P39038 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh4P39038 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh4P39038 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cdh4P39038 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdh4P39038 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.01■□□□□ 0.31
Cdh4P39038 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cdh4P39038 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.01■□□□□ 0.31
Cdh4P39038 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.01■□□□□ 0.31
Cdh4P39038 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdh4P39038 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh4P39038 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh4P39038 Gm35558-201ENSMUST00000222675 2219 ntBASIC17■□□□□ 0.31
Cdh4P39038 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdh4P39038 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17■□□□□ 0.31
Cdh4P39038 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 Fam105a-203ENSMUST00000226170 3043 ntBASIC17■□□□□ 0.31
Cdh4P39038 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdh4P39038 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17■□□□□ 0.31
Cdh4P39038 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh4P39038 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdh4P39038 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh4P39038 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.99■□□□□ 0.31
Cdh4P39038 Gm15375-201ENSMUST00000119510 849 ntBASIC16.99■□□□□ 0.31
Cdh4P39038 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh4P39038 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.99■□□□□ 0.31
Cdh4P39038 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh4P39038 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh4P39038 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh4P39038 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdh4P39038 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh4P39038 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.98■□□□□ 0.31
Cdh4P39038 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdh4P39038 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.98■□□□□ 0.31
Cdh4P39038 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cdh4P39038 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh4P39038 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms