Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rfc1P35601 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.78■□□□□ 0.6
Rfc1P35601 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.78■□□□□ 0.6
Rfc1P35601 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rfc1P35601 Gm8969-201ENSMUST00000199694 526 ntBASIC18.78■□□□□ 0.6
Rfc1P35601 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rfc1P35601 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rfc1P35601 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rfc1P35601 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfc1P35601 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfc1P35601 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfc1P35601 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfc1P35601 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfc1P35601 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfc1P35601 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.77■□□□□ 0.59
Rfc1P35601 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rfc1P35601 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.76■□□□□ 0.59
Rfc1P35601 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.76■□□□□ 0.59
Rfc1P35601 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfc1P35601 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rfc1P35601 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rfc1P35601 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Gm7860-201ENSMUST00000121190 879 ntBASIC18.75■□□□□ 0.59
Rfc1P35601 Gm11421-201ENSMUST00000122124 294 ntBASIC18.75■□□□□ 0.59
Rfc1P35601 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.75■□□□□ 0.59
Rfc1P35601 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rfc1P35601 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfc1P35601 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rfc1P35601 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rfc1P35601 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc1P35601 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.73■□□□□ 0.59
Rfc1P35601 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rfc1P35601 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Rfc1P35601 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.73■□□□□ 0.59
Rfc1P35601 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rfc1P35601 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc1P35601 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfc1P35601 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Rfc1P35601 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Rfc1P35601 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.72■□□□□ 0.59
Rfc1P35601 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rfc1P35601 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfc1P35601 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc1P35601 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms