Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Foxa1P35582 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.49■□□□□ 0.23
Foxa1P35582 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.49■□□□□ 0.23
Foxa1P35582 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Gm13158-201ENSMUST00000122007 736 ntBASIC16.49■□□□□ 0.23
Foxa1P35582 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.49■□□□□ 0.23
Foxa1P35582 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.49■□□□□ 0.23
Foxa1P35582 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Foxa1P35582 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.49■□□□□ 0.23
Foxa1P35582 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Foxa1P35582 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Gm10138-203ENSMUST00000206952 366 ntBASIC16.48■□□□□ 0.23
Foxa1P35582 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.48■□□□□ 0.23
Foxa1P35582 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Foxa1P35582 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Foxa1P35582 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.48■□□□□ 0.23
Foxa1P35582 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Foxa1P35582 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Foxa1P35582 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.47■□□□□ 0.23
Foxa1P35582 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.47■□□□□ 0.23
Foxa1P35582 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Foxa1P35582 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Foxa1P35582 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Foxa1P35582 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.46■□□□□ 0.23
Foxa1P35582 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Foxa1P35582 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Foxa1P35582 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.46■□□□□ 0.23
Foxa1P35582 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Foxa1P35582 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Foxa1P35582 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Foxa1P35582 Gm20760-201ENSMUST00000179197 648 ntBASIC16.46■□□□□ 0.23
Foxa1P35582 Gm27011-201ENSMUST00000182352 972 ntBASIC16.46■□□□□ 0.23
Foxa1P35582 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.46■□□□□ 0.23
Foxa1P35582 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.46■□□□□ 0.23
Foxa1P35582 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.46■□□□□ 0.23
Foxa1P35582 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Foxa1P35582 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Foxa1P35582 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Foxa1P35582 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
Foxa1P35582 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Foxa1P35582 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Mir2861-201ENSMUST00000175539 82 ntBASIC16.45■□□□□ 0.22
Foxa1P35582 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Foxa1P35582 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Foxa1P35582 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Foxa1P35582 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Foxa1P35582 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.44■□□□□ 0.22
Foxa1P35582 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.44■□□□□ 0.22
Foxa1P35582 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Gm15375-201ENSMUST00000119510 849 ntBASIC16.44■□□□□ 0.22
Foxa1P35582 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Foxa1P35582 Gm18666-201ENSMUST00000190039 958 ntBASIC16.44■□□□□ 0.22
Foxa1P35582 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms