Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc6a13P31649 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc6a13P31649 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a13P31649 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a13P31649 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a13P31649 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a13P31649 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Gm15375-201ENSMUST00000119510 849 ntBASIC18.08■□□□□ 0.48
Slc6a13P31649 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a13P31649 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Slc6a13P31649 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.07■□□□□ 0.48
Slc6a13P31649 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.07■□□□□ 0.48
Slc6a13P31649 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.07■□□□□ 0.48
Slc6a13P31649 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a13P31649 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a13P31649 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a13P31649 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a13P31649 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a13P31649 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a13P31649 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.06■□□□□ 0.48
Slc6a13P31649 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Slc6a13P31649 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a13P31649 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a13P31649 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a13P31649 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Gm5643-201ENSMUST00000117081 966 ntBASIC18.05■□□□□ 0.48
Slc6a13P31649 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.05■□□□□ 0.48
Slc6a13P31649 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.05■□□□□ 0.48
Slc6a13P31649 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.05■□□□□ 0.48
Slc6a13P31649 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a13P31649 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a13P31649 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.04■□□□□ 0.48
Slc6a13P31649 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.04■□□□□ 0.48
Slc6a13P31649 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Slc6a13P31649 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.04■□□□□ 0.48
Slc6a13P31649 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a13P31649 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.03■□□□□ 0.48
Slc6a13P31649 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Slc6a13P31649 Gm20760-201ENSMUST00000179197 648 ntBASIC18.03■□□□□ 0.48
Slc6a13P31649 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc6a13P31649 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a13P31649 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Slc6a13P31649 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.02■□□□□ 0.48
Slc6a13P31649 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a13P31649 Gm13401-201ENSMUST00000117074 291 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms