Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.54■□□□□ 0.24
Nedd8P29595 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nedd8P29595 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.54■□□□□ 0.24
Nedd8P29595 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Tgds-204ENSMUST00000228543 1594 ntBASIC16.54■□□□□ 0.24
Nedd8P29595 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nedd8P29595 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nedd8P29595 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.53■□□□□ 0.24
Nedd8P29595 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.53■□□□□ 0.24
Nedd8P29595 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Nedd8P29595 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nedd8P29595 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.53■□□□□ 0.24
Nedd8P29595 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nedd8P29595 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nedd8P29595 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nedd8P29595 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nedd8P29595 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.52■□□□□ 0.24
Nedd8P29595 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nedd8P29595 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.51■□□□□ 0.23
Nedd8P29595 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Nedd8P29595 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.51■□□□□ 0.23
Nedd8P29595 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.51■□□□□ 0.23
Nedd8P29595 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nedd8P29595 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nedd8P29595 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nedd8P29595 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nedd8P29595 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.5■□□□□ 0.23
Nedd8P29595 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nedd8P29595 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nedd8P29595 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.5■□□□□ 0.23
Nedd8P29595 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nedd8P29595 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.49■□□□□ 0.23
Nedd8P29595 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nedd8P29595 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Nedd8P29595 Gm7860-201ENSMUST00000121190 879 ntBASIC16.49■□□□□ 0.23
Nedd8P29595 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms