Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Gm13216-201ENSMUST00000117145 591 ntBASIC17.92■□□□□ 0.46
RxrbP28704 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RxrbP28704 Gm38205-201ENSMUST00000192243 258 ntBASIC17.92■□□□□ 0.46
RxrbP28704 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RxrbP28704 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RxrbP28704 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.92■□□□□ 0.46
RxrbP28704 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RxrbP28704 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RxrbP28704 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RxrbP28704 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RxrbP28704 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RxrbP28704 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RxrbP28704 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.91■□□□□ 0.46
RxrbP28704 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.91■□□□□ 0.46
RxrbP28704 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RxrbP28704 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.91■□□□□ 0.46
RxrbP28704 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.91■□□□□ 0.46
RxrbP28704 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RxrbP28704 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RxrbP28704 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.91■□□□□ 0.46
RxrbP28704 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RxrbP28704 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RxrbP28704 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RxrbP28704 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.9■□□□□ 0.46
RxrbP28704 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.9■□□□□ 0.46
RxrbP28704 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.9■□□□□ 0.46
RxrbP28704 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Dancr-204ENSMUST00000132389 2347 ntBASIC17.9■□□□□ 0.46
RxrbP28704 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RxrbP28704 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RxrbP28704 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RxrbP28704 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RxrbP28704 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.89■□□□□ 0.45
RxrbP28704 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.89■□□□□ 0.45
RxrbP28704 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RxrbP28704 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RxrbP28704 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RxrbP28704 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RxrbP28704 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.88■□□□□ 0.45
RxrbP28704 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RxrbP28704 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.88■□□□□ 0.45
RxrbP28704 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RxrbP28704 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RxrbP28704 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RxrbP28704 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RxrbP28704 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.87■□□□□ 0.45
RxrbP28704 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.87■□□□□ 0.45
RxrbP28704 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.87■□□□□ 0.45
RxrbP28704 Gm13146-201ENSMUST00000118508 780 ntBASIC17.87■□□□□ 0.45
RxrbP28704 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RxrbP28704 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.87■□□□□ 0.45
RxrbP28704 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RxrbP28704 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms