Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccl6P27784 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.9□□□□□ -0.18
Ccl6P27784 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccl6P27784 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccl6P27784 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ccl6P27784 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccl6P27784 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccl6P27784 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccl6P27784 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccl6P27784 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccl6P27784 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccl6P27784 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccl6P27784 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccl6P27784 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccl6P27784 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccl6P27784 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccl6P27784 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccl6P27784 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccl6P27784 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccl6P27784 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccl6P27784 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ccl6P27784 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccl6P27784 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccl6P27784 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ccl6P27784 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccl6P27784 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ccl6P27784 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl6P27784 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.87□□□□□ -0.19
Ccl6P27784 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl6P27784 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccl6P27784 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccl6P27784 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccl6P27784 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccl6P27784 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccl6P27784 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Gm10602-201ENSMUST00000098239 609 ntBASIC13.86□□□□□ -0.19
Ccl6P27784 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccl6P27784 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.86□□□□□ -0.19
Ccl6P27784 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccl6P27784 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl6P27784 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl6P27784 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Ccl6P27784 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl6P27784 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Ccl6P27784 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl6P27784 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl6P27784 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms