Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.31■□□□□ 0.52
Nfkb1P25799 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.31■□□□□ 0.52
Nfkb1P25799 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nfkb1P25799 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nfkb1P25799 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.31■□□□□ 0.52
Nfkb1P25799 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nfkb1P25799 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Nfkb1P25799 Gm21814-202ENSMUST00000203277 873 ntBASIC18.3■□□□□ 0.52
Nfkb1P25799 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nfkb1P25799 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nfkb1P25799 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nfkb1P25799 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.29■□□□□ 0.52
Nfkb1P25799 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.29■□□□□ 0.52
Nfkb1P25799 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.29■□□□□ 0.52
Nfkb1P25799 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nfkb1P25799 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.29■□□□□ 0.52
Nfkb1P25799 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.29■□□□□ 0.52
Nfkb1P25799 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nfkb1P25799 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nfkb1P25799 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nfkb1P25799 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nfkb1P25799 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Nfkb1P25799 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nfkb1P25799 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.28■□□□□ 0.52
Nfkb1P25799 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nfkb1P25799 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Gm7977-201ENSMUST00000193787 748 ntBASIC18.27■□□□□ 0.52
Nfkb1P25799 Gm43799-201ENSMUST00000201845 579 ntBASIC18.27■□□□□ 0.52
Nfkb1P25799 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.27■□□□□ 0.52
Nfkb1P25799 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.27■□□□□ 0.52
Nfkb1P25799 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nfkb1P25799 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nfkb1P25799 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nfkb1P25799 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nfkb1P25799 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nfkb1P25799 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nfkb1P25799 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.26■□□□□ 0.51
Nfkb1P25799 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nfkb1P25799 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Nfkb1P25799 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.26■□□□□ 0.51
Nfkb1P25799 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.26■□□□□ 0.51
Nfkb1P25799 Timm23-208ENSMUST00000226683 750 ntBASIC18.26■□□□□ 0.51
Nfkb1P25799 Gm9987-201ENSMUST00000069768 567 ntBASIC18.26■□□□□ 0.51
Nfkb1P25799 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nfkb1P25799 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nfkb1P25799 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nfkb1P25799 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.26■□□□□ 0.51
Nfkb1P25799 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.25■□□□□ 0.51
Nfkb1P25799 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nfkb1P25799 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nfkb1P25799 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms