Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.35■□□□□ 0.21
Hmgn1P18608 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Hmgn1P18608 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hmgn1P18608 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Hmgn1P18608 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.35■□□□□ 0.21
Hmgn1P18608 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn1P18608 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.34■□□□□ 0.21
Hmgn1P18608 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgn1P18608 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn1P18608 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.34■□□□□ 0.21
Hmgn1P18608 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn1P18608 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Hmgn1P18608 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn1P18608 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Hmgn1P18608 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn1P18608 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn1P18608 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Gm9988-201ENSMUST00000069786 435 ntBASIC16.33■□□□□ 0.2
Hmgn1P18608 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hmgn1P18608 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmgn1P18608 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn1P18608 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hmgn1P18608 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.33■□□□□ 0.2
Hmgn1P18608 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Hmgn1P18608 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.32■□□□□ 0.2
Hmgn1P18608 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgn1P18608 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmgn1P18608 Reep4-203ENSMUST00000226563 1444 ntBASIC16.32■□□□□ 0.2
Hmgn1P18608 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn1P18608 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.31■□□□□ 0.2
Hmgn1P18608 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.31■□□□□ 0.2
Hmgn1P18608 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn1P18608 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgn1P18608 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn1P18608 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms