Protein–RNA interactions for Protein: P17125

Tgfb3, Transforming growth factor beta-3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb3P17125 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tgfb3P17125 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tgfb3P17125 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.39■□□□□ 0.37
Tgfb3P17125 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.39■□□□□ 0.37
Tgfb3P17125 Gm18025-201ENSMUST00000221733 862 ntBASIC17.39■□□□□ 0.37
Tgfb3P17125 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tgfb3P17125 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tgfb3P17125 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tgfb3P17125 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
Tgfb3P17125 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Tgfb3P17125 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tgfb3P17125 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.37■□□□□ 0.37
Tgfb3P17125 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tgfb3P17125 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.37■□□□□ 0.37
Tgfb3P17125 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.37■□□□□ 0.37
Tgfb3P17125 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tgfb3P17125 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tgfb3P17125 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.36■□□□□ 0.37
Tgfb3P17125 Mir2861-201ENSMUST00000175539 82 ntBASIC17.36■□□□□ 0.37
Tgfb3P17125 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.36■□□□□ 0.37
Tgfb3P17125 Gm42545-201ENSMUST00000202755 922 ntBASIC17.36■□□□□ 0.37
Tgfb3P17125 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tgfb3P17125 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tgfb3P17125 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.35■□□□□ 0.37
Tgfb3P17125 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.35■□□□□ 0.37
Tgfb3P17125 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.35■□□□□ 0.37
Tgfb3P17125 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tgfb3P17125 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.35■□□□□ 0.37
Tgfb3P17125 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Tgfb3P17125 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tgfb3P17125 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tgfb3P17125 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Tgfb3P17125 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms