Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.13■□□□□ 0.49
Rb1P13405 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rb1P13405 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.13■□□□□ 0.49
Rb1P13405 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rb1P13405 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rb1P13405 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Rb1P13405 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rb1P13405 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.12■□□□□ 0.49
Rb1P13405 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rb1P13405 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.12■□□□□ 0.49
Rb1P13405 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rb1P13405 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Flg-201ENSMUST00000050758 1488 ntBASIC18.12■□□□□ 0.49
Rb1P13405 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rb1P13405 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Rb1P13405 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.11■□□□□ 0.49
Rb1P13405 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.11■□□□□ 0.49
Rb1P13405 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rb1P13405 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rb1P13405 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Rb1P13405 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rb1P13405 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rb1P13405 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rb1P13405 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rb1P13405 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rb1P13405 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.1■□□□□ 0.49
Rb1P13405 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.1■□□□□ 0.49
Rb1P13405 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rb1P13405 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rb1P13405 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rb1P13405 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rb1P13405 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rb1P13405 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rb1P13405 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rb1P13405 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rb1P13405 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rb1P13405 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rb1P13405 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rb1P13405 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rb1P13405 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rb1P13405 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.08■□□□□ 0.48
Rb1P13405 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms