Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.55■□□□□ 0.88
Calm3P0DP28 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Calm3P0DP28 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calm3P0DP28 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Calm3P0DP28 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Gm42545-201ENSMUST00000202755 922 ntBASIC20.54■□□□□ 0.88
Calm3P0DP28 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.54■□□□□ 0.88
Calm3P0DP28 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calm3P0DP28 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.54■□□□□ 0.88
Calm3P0DP28 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.53■□□□□ 0.88
Calm3P0DP28 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.53■□□□□ 0.88
Calm3P0DP28 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.53■□□□□ 0.88
Calm3P0DP28 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.53■□□□□ 0.88
Calm3P0DP28 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Calm3P0DP28 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calm3P0DP28 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.52■□□□□ 0.88
Calm3P0DP28 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.52■□□□□ 0.88
Calm3P0DP28 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calm3P0DP28 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Calm3P0DP28 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calm3P0DP28 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Calm3P0DP28 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Calm3P0DP28 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Calm3P0DP28 Gm37292-201ENSMUST00000192062 758 ntBASIC20.51■□□□□ 0.87
Calm3P0DP28 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.51■□□□□ 0.87
Calm3P0DP28 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 Idnk-204ENSMUST00000226010 1898 ntBASIC20.51■□□□□ 0.87
Calm3P0DP28 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.51■□□□□ 0.87
Calm3P0DP28 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Calm3P0DP28 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calm3P0DP28 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.5■□□□□ 0.87
Calm3P0DP28 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Grk6-206ENSMUST00000224995 2971 ntBASIC20.5■□□□□ 0.87
Calm3P0DP28 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Calm3P0DP28 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calm3P0DP28 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Calm3P0DP28 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Calm3P0DP28 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Gm43183-201ENSMUST00000200632 547 ntBASIC20.49■□□□□ 0.87
Calm3P0DP28 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calm3P0DP28 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calm3P0DP28 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms