Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Gm13559-201ENSMUST00000120476 863 ntBASIC18.12■□□□□ 0.49
Rc3h2P0C090 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h2P0C090 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.12■□□□□ 0.49
Rc3h2P0C090 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm11539-201ENSMUST00000119837 557 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm13436-201ENSMUST00000120418 567 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm10231-201ENSMUST00000181584 441 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm10517-202ENSMUST00000192970 758 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Gm10175-202ENSMUST00000208752 441 ntBASIC18.11■□□□□ 0.49
Rc3h2P0C090 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h2P0C090 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rc3h2P0C090 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h2P0C090 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rc3h2P0C090 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
Rc3h2P0C090 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rc3h2P0C090 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h2P0C090 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h2P0C090 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h2P0C090 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Gm12085-201ENSMUST00000119263 940 ntBASIC18.08■□□□□ 0.48
Rc3h2P0C090 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.48
Rc3h2P0C090 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h2P0C090 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h2P0C090 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.06■□□□□ 0.48
Rc3h2P0C090 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms