Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
NefmP08553 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NefmP08553 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NefmP08553 Gm44544-201ENSMUST00000207052 1844 ntBASIC26.35■■□□□ 1.81
NefmP08553 Gm10461-201ENSMUST00000202073 4786 ntBASIC26.35■■□□□ 1.81
NefmP08553 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC26.35■■□□□ 1.81
NefmP08553 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC26.35■■□□□ 1.81
NefmP08553 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC26.35■■□□□ 1.81
NefmP08553 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
NefmP08553 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
NefmP08553 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC26.35■■□□□ 1.81
NefmP08553 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
NefmP08553 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NefmP08553 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.34■■□□□ 1.81
NefmP08553 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
NefmP08553 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NefmP08553 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC26.34■■□□□ 1.81
NefmP08553 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC26.34■■□□□ 1.81
NefmP08553 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NefmP08553 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NefmP08553 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NefmP08553 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NefmP08553 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
NefmP08553 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
NefmP08553 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC26.33■■□□□ 1.81
NefmP08553 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NefmP08553 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
NefmP08553 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC26.31■■□□□ 1.8
NefmP08553 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC26.31■■□□□ 1.8
NefmP08553 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Gm42778-201ENSMUST00000199644 553 ntBASIC26.31■■□□□ 1.8
NefmP08553 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC26.31■■□□□ 1.8
NefmP08553 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NefmP08553 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC26.3■■□□□ 1.8
NefmP08553 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
NefmP08553 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
NefmP08553 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.3■■□□□ 1.8
NefmP08553 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NefmP08553 Gm43548-201ENSMUST00000197139 2353 ntBASIC26.29■■□□□ 1.8
NefmP08553 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC26.29■■□□□ 1.8
NefmP08553 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NefmP08553 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NefmP08553 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NefmP08553 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NefmP08553 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NefmP08553 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NefmP08553 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
NefmP08553 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NefmP08553 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms