Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sod1P08228 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.81■□□□□ 0.28
Sod1P08228 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.81■□□□□ 0.28
Sod1P08228 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Sod1P08228 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sod1P08228 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sod1P08228 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sod1P08228 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
Sod1P08228 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sod1P08228 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sod1P08228 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.8■□□□□ 0.28
Sod1P08228 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sod1P08228 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.79■□□□□ 0.28
Sod1P08228 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sod1P08228 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.78■□□□□ 0.28
Sod1P08228 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.78■□□□□ 0.28
Sod1P08228 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sod1P08228 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.78■□□□□ 0.28
Sod1P08228 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Sod1P08228 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sod1P08228 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sod1P08228 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.77■□□□□ 0.28
Sod1P08228 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Gm9731-201ENSMUST00000209480 747 ntBASIC16.77■□□□□ 0.28
Sod1P08228 Il3ra-202ENSMUST00000223589 738 ntBASIC16.77■□□□□ 0.28
Sod1P08228 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sod1P08228 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sod1P08228 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.76■□□□□ 0.27
Sod1P08228 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.76■□□□□ 0.27
Sod1P08228 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sod1P08228 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sod1P08228 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sod1P08228 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms