Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.93□□□□□ -0.02
Ercc1P07903 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc1P07903 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ercc1P07903 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.93□□□□□ -0.02
Ercc1P07903 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc1P07903 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.92□□□□□ -0.02
Ercc1P07903 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.92□□□□□ -0.02
Ercc1P07903 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ercc1P07903 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.92□□□□□ -0.02
Ercc1P07903 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ercc1P07903 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ercc1P07903 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.91□□□□□ -0.02
Ercc1P07903 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ercc1P07903 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Gm45417-201ENSMUST00000209533 758 ntBASIC14.91□□□□□ -0.02
Ercc1P07903 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.91□□□□□ -0.02
Ercc1P07903 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ercc1P07903 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ercc1P07903 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ercc1P07903 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.9□□□□□ -0.02
Ercc1P07903 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ercc1P07903 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.9□□□□□ -0.02
Ercc1P07903 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ercc1P07903 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.9□□□□□ -0.02
Ercc1P07903 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ercc1P07903 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ercc1P07903 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.9□□□□□ -0.02
Ercc1P07903 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.9□□□□□ -0.02
Ercc1P07903 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.89□□□□□ -0.03
Ercc1P07903 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.89□□□□□ -0.03
Ercc1P07903 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.89□□□□□ -0.03
Ercc1P07903 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ercc1P07903 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.89□□□□□ -0.03
Ercc1P07903 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ercc1P07903 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms