Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P06328 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.06□□□□□ -0.32
P06328 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06328 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.05□□□□□ -0.32
P06328 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
P06328 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.05□□□□□ -0.32
P06328 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06328 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
P06328 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.04□□□□□ -0.32
P06328 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P06328 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
P06328 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.04□□□□□ -0.32
P06328 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
P06328 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P06328 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06328 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.04□□□□□ -0.32
P06328 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
P06328 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
P06328 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Gm10033-202ENSMUST00000211874 928 ntBASIC13.03□□□□□ -0.32
P06328 Gm18671-201ENSMUST00000214826 683 ntBASIC13.03□□□□□ -0.32
P06328 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.03□□□□□ -0.32
P06328 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.03□□□□□ -0.32
P06328 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06328 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.02□□□□□ -0.32
P06328 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
P06328 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Idnk-204ENSMUST00000226010 1898 ntBASIC13.02□□□□□ -0.32
P06328 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06328 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.02□□□□□ -0.33
P06328 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
P06328 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
P06328 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06328 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06328 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms