Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Gm7638-201ENSMUST00000121348 967 ntBASIC18.5■□□□□ 0.55
PrnpP04925 Gm13474-201ENSMUST00000122466 815 ntBASIC18.5■□□□□ 0.55
PrnpP04925 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Gm24841-201ENSMUST00000158676 357 ntBASIC18.5■□□□□ 0.55
PrnpP04925 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PrnpP04925 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PrnpP04925 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrnpP04925 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.5■□□□□ 0.55
PrnpP04925 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PrnpP04925 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PrnpP04925 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PrnpP04925 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PrnpP04925 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PrnpP04925 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.49■□□□□ 0.55
PrnpP04925 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.49■□□□□ 0.55
PrnpP04925 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PrnpP04925 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.49■□□□□ 0.55
PrnpP04925 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrnpP04925 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PrnpP04925 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.48■□□□□ 0.55
PrnpP04925 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PrnpP04925 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PrnpP04925 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PrnpP04925 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PrnpP04925 Gm13401-201ENSMUST00000117074 291 ntBASIC18.48■□□□□ 0.55
PrnpP04925 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
PrnpP04925 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.48■□□□□ 0.55
PrnpP04925 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrnpP04925 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PrnpP04925 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.47■□□□□ 0.55
PrnpP04925 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PrnpP04925 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.47■□□□□ 0.55
PrnpP04925 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Tgds-204ENSMUST00000228543 1594 ntBASIC18.47■□□□□ 0.55
PrnpP04925 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PrnpP04925 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Gm25016-201ENSMUST00000158399 131 ntBASIC18.47■□□□□ 0.55
PrnpP04925 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PrnpP04925 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Gm7791-201ENSMUST00000219066 539 ntBASIC18.47■□□□□ 0.55
PrnpP04925 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.47■□□□□ 0.55
PrnpP04925 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrnpP04925 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PrnpP04925 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Gm29791-202ENSMUST00000207888 369 ntBASIC18.46■□□□□ 0.55
PrnpP04925 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PrnpP04925 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PrnpP04925 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PrnpP04925 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PrnpP04925 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PrnpP04925 Gm14859-201ENSMUST00000117752 357 ntBASIC18.45■□□□□ 0.54
PrnpP04925 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrnpP04925 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms