Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.27■□□□□ 0.2
P01852 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.27■□□□□ 0.2
P01852 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.27■□□□□ 0.2
P01852 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01852 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01852 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01852 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P01852 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01852 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
P01852 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.26■□□□□ 0.19
P01852 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01852 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.26■□□□□ 0.19
P01852 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.26■□□□□ 0.19
P01852 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.25■□□□□ 0.19
P01852 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
P01852 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
P01852 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.25■□□□□ 0.19
P01852 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.25■□□□□ 0.19
P01852 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Gm5643-201ENSMUST00000117081 966 ntBASIC16.25■□□□□ 0.19
P01852 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
P01852 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
P01852 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01852 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.24■□□□□ 0.19
P01852 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01852 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.23■□□□□ 0.19
P01852 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P01852 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.23■□□□□ 0.19
P01852 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.23■□□□□ 0.19
P01852 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.23■□□□□ 0.19
P01852 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P01852 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01852 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P01852 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P01852 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
P01852 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.22■□□□□ 0.19
P01852 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.22■□□□□ 0.19
P01852 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
P01852 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01852 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P01852 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 189.1 ms