Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm9847-201ENSMUST00000052528 599 ntBASIC13.03□□□□□ -0.32
TcraP01849 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TcraP01849 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.03□□□□□ -0.32
TcraP01849 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
TcraP01849 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.02□□□□□ -0.32
TcraP01849 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TcraP01849 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TcraP01849 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TcraP01849 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TcraP01849 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TcraP01849 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
TcraP01849 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TcraP01849 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.02□□□□□ -0.33
TcraP01849 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TcraP01849 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TcraP01849 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TcraP01849 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TcraP01849 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TcraP01849 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TcraP01849 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.01□□□□□ -0.33
TcraP01849 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TcraP01849 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TcraP01849 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TcraP01849 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13□□□□□ -0.33
TcraP01849 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13□□□□□ -0.33
TcraP01849 Gm5576-201ENSMUST00000075809 1236 ntBASIC13□□□□□ -0.33
TcraP01849 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TcraP01849 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13□□□□□ -0.33
TcraP01849 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TcraP01849 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TcraP01849 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13□□□□□ -0.33
TcraP01849 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TcraP01849 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TcraP01849 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.99□□□□□ -0.33
TcraP01849 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.99□□□□□ -0.33
TcraP01849 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TcraP01849 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TcraP01849 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TcraP01849 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms