Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01808 Idnk-204ENSMUST00000226010 1898 ntBASIC16.14■□□□□ 0.17
P01808 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.14■□□□□ 0.17
P01808 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.14■□□□□ 0.17
P01808 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P01808 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
P01808 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
P01808 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.13■□□□□ 0.17
P01808 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.13■□□□□ 0.17
P01808 Gm20760-201ENSMUST00000179197 648 ntBASIC16.13■□□□□ 0.17
P01808 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.13■□□□□ 0.17
P01808 Gm18666-201ENSMUST00000190039 958 ntBASIC16.13■□□□□ 0.17
P01808 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
P01808 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.13■□□□□ 0.17
P01808 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.13■□□□□ 0.17
P01808 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.13■□□□□ 0.17
P01808 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P01808 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.13■□□□□ 0.17
P01808 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.13■□□□□ 0.17
P01808 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.12■□□□□ 0.17
P01808 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P01808 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.12■□□□□ 0.17
P01808 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P01808 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.12■□□□□ 0.17
P01808 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Gm5643-201ENSMUST00000117081 966 ntBASIC16.12■□□□□ 0.17
P01808 Mir6349-201ENSMUST00000184059 97 ntBASIC16.12■□□□□ 0.17
P01808 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
P01808 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01808 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
P01808 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.11■□□□□ 0.17
P01808 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
P01808 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
P01808 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
P01808 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.11■□□□□ 0.17
P01808 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.11■□□□□ 0.17
P01808 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
P01808 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.11■□□□□ 0.17
P01808 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01808 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
P01808 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.1■□□□□ 0.17
P01808 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
P01808 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P01808 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.09■□□□□ 0.17
P01808 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.09■□□□□ 0.17
P01808 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P01808 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms