Protein–RNA interactions for Protein: P01735

T-cell receptor beta chain V region 86T1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01735 Gm12933-201ENSMUST00000120203 872 ntBASIC16.35■□□□□ 0.21
P01735 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.35■□□□□ 0.21
P01735 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P01735 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
P01735 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.35■□□□□ 0.21
P01735 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.35■□□□□ 0.21
P01735 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01735 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P01735 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
P01735 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.34■□□□□ 0.21
P01735 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.34■□□□□ 0.21
P01735 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P01735 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
P01735 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.33■□□□□ 0.2
P01735 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.33■□□□□ 0.2
P01735 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.33■□□□□ 0.2
P01735 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
P01735 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.33■□□□□ 0.2
P01735 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P01735 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.32■□□□□ 0.2
P01735 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.32■□□□□ 0.2
P01735 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.32■□□□□ 0.2
P01735 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.32■□□□□ 0.2
P01735 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.32■□□□□ 0.2
P01735 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.32■□□□□ 0.2
P01735 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P01735 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P01735 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
P01735 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Flg-201ENSMUST00000050758 1488 ntBASIC16.31■□□□□ 0.2
P01735 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
P01735 Gm8969-201ENSMUST00000199694 526 ntBASIC16.31■□□□□ 0.2
P01735 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P01735 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P01735 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms