Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Matn4O89029 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Matn4O89029 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Matn4O89029 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Matn4O89029 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Matn4O89029 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Matn4O89029 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.83■□□□□ 0.28
Matn4O89029 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
Matn4O89029 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Matn4O89029 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.82■□□□□ 0.28
Matn4O89029 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Matn4O89029 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn4O89029 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Matn4O89029 Gm42778-201ENSMUST00000199644 553 ntBASIC16.81■□□□□ 0.28
Matn4O89029 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Matn4O89029 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Matn4O89029 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn4O89029 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.8■□□□□ 0.28
Matn4O89029 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Matn4O89029 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Matn4O89029 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
Matn4O89029 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Matn4O89029 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Matn4O89029 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.8■□□□□ 0.28
Matn4O89029 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn4O89029 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.8■□□□□ 0.28
Matn4O89029 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.8■□□□□ 0.28
Matn4O89029 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.79■□□□□ 0.28
Matn4O89029 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Matn4O89029 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn4O89029 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms