Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hdac3O88895 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Hdac3O88895 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Gm6365-201ENSMUST00000054711 744 ntBASIC15.92■□□□□ 0.14
Hdac3O88895 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hdac3O88895 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hdac3O88895 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Gm7291-201ENSMUST00000199147 382 ntBASIC15.91■□□□□ 0.14
Hdac3O88895 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Hdac3O88895 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hdac3O88895 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Hdac3O88895 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.9■□□□□ 0.14
Hdac3O88895 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Gm22325-201ENSMUST00000158904 308 ntBASIC15.9■□□□□ 0.14
Hdac3O88895 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.9■□□□□ 0.14
Hdac3O88895 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.9■□□□□ 0.14
Hdac3O88895 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hdac3O88895 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Hdac3O88895 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.89■□□□□ 0.13
Hdac3O88895 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Hdac3O88895 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.89■□□□□ 0.13
Hdac3O88895 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.89■□□□□ 0.13
Hdac3O88895 Gm8969-201ENSMUST00000199694 526 ntBASIC15.89■□□□□ 0.13
Hdac3O88895 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.89■□□□□ 0.13
Hdac3O88895 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hdac3O88895 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Hdac3O88895 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Hdac3O88895 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Gm12933-201ENSMUST00000120203 872 ntBASIC15.88■□□□□ 0.13
Hdac3O88895 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.88■□□□□ 0.13
Hdac3O88895 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Hdac3O88895 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.88■□□□□ 0.13
Hdac3O88895 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hdac3O88895 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Hdac3O88895 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hdac3O88895 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.87■□□□□ 0.13
Hdac3O88895 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms