Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn1O88704 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Hcn1O88704 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hcn1O88704 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.05■□□□□ 0.32
Hcn1O88704 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hcn1O88704 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Hcn1O88704 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hcn1O88704 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.05■□□□□ 0.32
Hcn1O88704 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hcn1O88704 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hcn1O88704 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hcn1O88704 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hcn1O88704 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hcn1O88704 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn1O88704 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.04■□□□□ 0.32
Hcn1O88704 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hcn1O88704 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hcn1O88704 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hcn1O88704 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Hcn1O88704 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.04■□□□□ 0.32
Hcn1O88704 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.04■□□□□ 0.32
Hcn1O88704 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.04■□□□□ 0.32
Hcn1O88704 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hcn1O88704 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hcn1O88704 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn1O88704 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Hcn1O88704 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn1O88704 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn1O88704 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.03■□□□□ 0.32
Hcn1O88704 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn1O88704 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Rab3c-203ENSMUST00000224180 967 ntBASIC17.03■□□□□ 0.32
Hcn1O88704 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.03■□□□□ 0.32
Hcn1O88704 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.03■□□□□ 0.32
Hcn1O88704 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hcn1O88704 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.03■□□□□ 0.32
Hcn1O88704 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn1O88704 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hcn1O88704 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.02■□□□□ 0.32
Hcn1O88704 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.02■□□□□ 0.32
Hcn1O88704 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.02■□□□□ 0.32
Hcn1O88704 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hcn1O88704 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn1O88704 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn1O88704 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Hcn1O88704 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms