Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.32■□□□□ 0.36
ClppO88696 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Gm11927-201ENSMUST00000118472 759 ntBASIC17.31■□□□□ 0.36
ClppO88696 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ClppO88696 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Gm10698-201ENSMUST00000182663 604 ntBASIC17.31■□□□□ 0.36
ClppO88696 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.31■□□□□ 0.36
ClppO88696 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClppO88696 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.3■□□□□ 0.36
ClppO88696 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ClppO88696 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Mir1199-201ENSMUST00000117015 119 ntBASIC17.3■□□□□ 0.36
ClppO88696 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.3■□□□□ 0.36
ClppO88696 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.3■□□□□ 0.36
ClppO88696 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ClppO88696 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClppO88696 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ClppO88696 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ClppO88696 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ClppO88696 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.29■□□□□ 0.36
ClppO88696 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.29■□□□□ 0.36
ClppO88696 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
ClppO88696 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClppO88696 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ClppO88696 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClppO88696 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Mir7071-201ENSMUST00000184847 69 ntBASIC17.28■□□□□ 0.36
ClppO88696 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClppO88696 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.28■□□□□ 0.36
ClppO88696 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClppO88696 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.28■□□□□ 0.36
ClppO88696 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.27■□□□□ 0.36
ClppO88696 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ClppO88696 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClppO88696 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.27■□□□□ 0.36
ClppO88696 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms