Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capns1O88456 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capns1O88456 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Capns1O88456 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.46■□□□□ 0.23
Capns1O88456 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Capns1O88456 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.46■□□□□ 0.23
Capns1O88456 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.46■□□□□ 0.23
Capns1O88456 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Capns1O88456 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Capns1O88456 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Capns1O88456 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Capns1O88456 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Capns1O88456 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.45■□□□□ 0.22
Capns1O88456 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.45■□□□□ 0.22
Capns1O88456 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.45■□□□□ 0.22
Capns1O88456 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.45■□□□□ 0.22
Capns1O88456 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Capns1O88456 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Capns1O88456 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capns1O88456 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Capns1O88456 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Capns1O88456 Gm8969-201ENSMUST00000199694 526 ntBASIC16.44■□□□□ 0.22
Capns1O88456 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capns1O88456 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.44■□□□□ 0.22
Capns1O88456 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Capns1O88456 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.43■□□□□ 0.22
Capns1O88456 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.43■□□□□ 0.22
Capns1O88456 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Capns1O88456 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.43■□□□□ 0.22
Capns1O88456 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capns1O88456 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.42■□□□□ 0.22
Capns1O88456 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.42■□□□□ 0.22
Capns1O88456 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.42■□□□□ 0.22
Capns1O88456 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.42■□□□□ 0.22
Capns1O88456 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Capns1O88456 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capns1O88456 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms