Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.66■□□□□ 0.26
Tulp3O88413 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tulp3O88413 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.66■□□□□ 0.26
Tulp3O88413 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tulp3O88413 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tulp3O88413 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
Tulp3O88413 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tulp3O88413 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tulp3O88413 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tulp3O88413 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Gm13534-201ENSMUST00000121169 513 ntBASIC16.65■□□□□ 0.26
Tulp3O88413 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tulp3O88413 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Tulp3O88413 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.65■□□□□ 0.26
Tulp3O88413 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tulp3O88413 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tulp3O88413 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tulp3O88413 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tulp3O88413 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tulp3O88413 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tulp3O88413 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tulp3O88413 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tulp3O88413 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tulp3O88413 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Gm22325-201ENSMUST00000158904 308 ntBASIC16.63■□□□□ 0.25
Tulp3O88413 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Gm9988-201ENSMUST00000069786 435 ntBASIC16.63■□□□□ 0.25
Tulp3O88413 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tulp3O88413 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tulp3O88413 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.62■□□□□ 0.25
Tulp3O88413 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tulp3O88413 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.62■□□□□ 0.25
Tulp3O88413 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tulp3O88413 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.62■□□□□ 0.25
Tulp3O88413 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.62■□□□□ 0.25
Tulp3O88413 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tulp3O88413 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.62■□□□□ 0.25
Tulp3O88413 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tulp3O88413 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tulp3O88413 Gm45417-201ENSMUST00000209533 758 ntBASIC16.61■□□□□ 0.25
Tulp3O88413 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tulp3O88413 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms