Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm10139O88245 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Gm10139O88245 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm10139O88245 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC10.86□□□□□ -0.67
Gm10139O88245 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Gm15635-204ENSMUST00000208024 2539 ntBASIC10.86□□□□□ -0.67
Gm10139O88245 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Gm10139O88245 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Gm42642-201ENSMUST00000200683 355 ntBASIC10.86□□□□□ -0.67
Gm10139O88245 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 AV356131-201ENSMUST00000206201 750 ntBASIC10.86□□□□□ -0.67
Gm10139O88245 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gm10139O88245 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Gm10139O88245 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Gm10139O88245 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Gm10139O88245 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm10139O88245 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm10139O88245 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm10139O88245 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm10139O88245 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm10139O88245 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm10139O88245 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Gm10139O88245 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm10139O88245 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm10139O88245 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm10139O88245 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm10139O88245 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.84□□□□□ -0.67
Gm10139O88245 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.84□□□□□ -0.67
Gm10139O88245 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.84□□□□□ -0.67
Gm10139O88245 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm10139O88245 Gm38285-201ENSMUST00000192928 922 ntBASIC10.84□□□□□ -0.67
Gm10139O88245 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm10139O88245 Gm5874-201ENSMUST00000096101 508 ntBASIC10.84□□□□□ -0.67
Gm10139O88245 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms