Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.76■□□□□ 0.59
Ttc3O88196 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ttc3O88196 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc3O88196 Gm18959-201ENSMUST00000208954 655 ntBASIC18.75■□□□□ 0.59
Ttc3O88196 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc3O88196 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc3O88196 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.75■□□□□ 0.59
Ttc3O88196 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc3O88196 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.75■□□□□ 0.59
Ttc3O88196 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ttc3O88196 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.75■□□□□ 0.59
Ttc3O88196 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc3O88196 Gm18032-201ENSMUST00000222541 538 ntBASIC18.75■□□□□ 0.59
Ttc3O88196 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ttc3O88196 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.74■□□□□ 0.59
Ttc3O88196 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ttc3O88196 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc3O88196 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.73■□□□□ 0.59
Ttc3O88196 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ttc3O88196 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc3O88196 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Idnk-204ENSMUST00000226010 1898 ntBASIC18.72■□□□□ 0.59
Ttc3O88196 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ttc3O88196 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.72■□□□□ 0.59
Ttc3O88196 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc3O88196 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.72■□□□□ 0.59
Ttc3O88196 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.72■□□□□ 0.59
Ttc3O88196 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ttc3O88196 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.72■□□□□ 0.59
Ttc3O88196 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.71■□□□□ 0.59
Ttc3O88196 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.71■□□□□ 0.59
Ttc3O88196 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.71■□□□□ 0.59
Ttc3O88196 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc3O88196 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Ttc3O88196 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.7■□□□□ 0.58
Ttc3O88196 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Ttc3O88196 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.7■□□□□ 0.58
Ttc3O88196 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.7■□□□□ 0.58
Ttc3O88196 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc3O88196 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.69■□□□□ 0.58
Ttc3O88196 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ttc3O88196 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc3O88196 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ttc3O88196 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.68■□□□□ 0.58
Ttc3O88196 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ttc3O88196 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc3O88196 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms