Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tspan6O70401 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tspan6O70401 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.38■□□□□ 0.37
Tspan6O70401 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.38■□□□□ 0.37
Tspan6O70401 Gm38027-201ENSMUST00000192315 235 ntBASIC17.38■□□□□ 0.37
Tspan6O70401 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Tspan6O70401 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.38■□□□□ 0.37
Tspan6O70401 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tspan6O70401 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tspan6O70401 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tspan6O70401 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.37■□□□□ 0.37
Tspan6O70401 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.37■□□□□ 0.37
Tspan6O70401 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tspan6O70401 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tspan6O70401 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Tgds-204ENSMUST00000228543 1594 ntBASIC17.36■□□□□ 0.37
Tspan6O70401 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.36■□□□□ 0.37
Tspan6O70401 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.36■□□□□ 0.37
Tspan6O70401 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.36■□□□□ 0.37
Tspan6O70401 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.36■□□□□ 0.37
Tspan6O70401 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.36■□□□□ 0.37
Tspan6O70401 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Tspan6O70401 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tspan6O70401 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tspan6O70401 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Tspan6O70401 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.35■□□□□ 0.37
Tspan6O70401 Golph3-205ENSMUST00000228671 2842 ntBASIC17.35■□□□□ 0.37
Tspan6O70401 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.35■□□□□ 0.37
Tspan6O70401 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tspan6O70401 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.35■□□□□ 0.37
Tspan6O70401 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tspan6O70401 Gm18959-201ENSMUST00000208954 655 ntBASIC17.35■□□□□ 0.37
Tspan6O70401 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.35■□□□□ 0.37
Tspan6O70401 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.35■□□□□ 0.37
Tspan6O70401 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tspan6O70401 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tspan6O70401 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.35■□□□□ 0.37
Tspan6O70401 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tspan6O70401 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tspan6O70401 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Tspan6O70401 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Tspan6O70401 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tspan6O70401 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tspan6O70401 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tspan6O70401 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tspan6O70401 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tspan6O70401 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tspan6O70401 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tspan6O70401 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tspan6O70401 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tspan6O70401 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tspan6O70401 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tspan6O70401 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms