Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm22240-201ENSMUST00000175225 82 ntBASIC17.58■□□□□ 0.4
Pdlim1O70400 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim1O70400 Gm29791-202ENSMUST00000207888 369 ntBASIC17.58■□□□□ 0.4
Pdlim1O70400 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.58■□□□□ 0.4
Pdlim1O70400 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim1O70400 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.57■□□□□ 0.4
Pdlim1O70400 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.57■□□□□ 0.4
Pdlim1O70400 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim1O70400 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim1O70400 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim1O70400 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdlim1O70400 Gm10698-201ENSMUST00000182663 604 ntBASIC17.56■□□□□ 0.4
Pdlim1O70400 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.56■□□□□ 0.4
Pdlim1O70400 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.56■□□□□ 0.4
Pdlim1O70400 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim1O70400 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim1O70400 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim1O70400 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim1O70400 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.54■□□□□ 0.4
Pdlim1O70400 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim1O70400 Gm42545-201ENSMUST00000202755 922 ntBASIC17.54■□□□□ 0.4
Pdlim1O70400 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.54■□□□□ 0.4
Pdlim1O70400 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim1O70400 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim1O70400 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Gm37292-201ENSMUST00000192062 758 ntBASIC17.53■□□□□ 0.4
Pdlim1O70400 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.53■□□□□ 0.4
Pdlim1O70400 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.53■□□□□ 0.4
Pdlim1O70400 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim1O70400 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdlim1O70400 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.53■□□□□ 0.4
Pdlim1O70400 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim1O70400 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.52■□□□□ 0.4
Pdlim1O70400 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Idnk-204ENSMUST00000226010 1898 ntBASIC17.52■□□□□ 0.4
Pdlim1O70400 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim1O70400 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim1O70400 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim1O70400 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.52■□□□□ 0.4
Pdlim1O70400 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms