Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx3O70137 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.16■□□□□ 0.18
Alx3O70137 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.16■□□□□ 0.18
Alx3O70137 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Alx3O70137 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Alx3O70137 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx3O70137 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Alx3O70137 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.15■□□□□ 0.18
Alx3O70137 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC16.15■□□□□ 0.18
Alx3O70137 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Alx3O70137 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Alx3O70137 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Alx3O70137 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.15■□□□□ 0.18
Alx3O70137 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx3O70137 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Alx3O70137 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Alx3O70137 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.14■□□□□ 0.18
Alx3O70137 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Alx3O70137 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.14■□□□□ 0.17
Alx3O70137 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Alx3O70137 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.14■□□□□ 0.17
Alx3O70137 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Alx3O70137 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.14■□□□□ 0.17
Alx3O70137 Nespas-201ENSMUST00000143738 1083 ntBASIC16.14■□□□□ 0.17
Alx3O70137 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Alx3O70137 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.14■□□□□ 0.17
Alx3O70137 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.14■□□□□ 0.17
Alx3O70137 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx3O70137 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Alx3O70137 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.13■□□□□ 0.17
Alx3O70137 AV356131-201ENSMUST00000206201 750 ntBASIC16.13■□□□□ 0.17
Alx3O70137 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.13■□□□□ 0.17
Alx3O70137 Gm5874-201ENSMUST00000096101 508 ntBASIC16.13■□□□□ 0.17
Alx3O70137 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.13■□□□□ 0.17
Alx3O70137 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Alx3O70137 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx3O70137 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Alx3O70137 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Alx3O70137 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx3O70137 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms