Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Gm12527-201ENSMUST00000117967 564 ntBASIC17.79■□□□□ 0.44
HcrtO55241 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.79■□□□□ 0.44
HcrtO55241 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HcrtO55241 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HcrtO55241 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HcrtO55241 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HcrtO55241 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HcrtO55241 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HcrtO55241 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HcrtO55241 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.78■□□□□ 0.44
HcrtO55241 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HcrtO55241 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.78■□□□□ 0.44
HcrtO55241 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.78■□□□□ 0.44
HcrtO55241 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HcrtO55241 Gm20049-201ENSMUST00000219950 730 ntBASIC17.78■□□□□ 0.44
HcrtO55241 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HcrtO55241 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HcrtO55241 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.44
HcrtO55241 Gm12441-201ENSMUST00000121806 588 ntBASIC17.77■□□□□ 0.44
HcrtO55241 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.77■□□□□ 0.44
HcrtO55241 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.77■□□□□ 0.44
HcrtO55241 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.77■□□□□ 0.44
HcrtO55241 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.77■□□□□ 0.44
HcrtO55241 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.77■□□□□ 0.44
HcrtO55241 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HcrtO55241 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HcrtO55241 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HcrtO55241 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HcrtO55241 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HcrtO55241 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.76■□□□□ 0.43
HcrtO55241 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HcrtO55241 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HcrtO55241 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.76■□□□□ 0.43
HcrtO55241 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HcrtO55241 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.75■□□□□ 0.43
HcrtO55241 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HcrtO55241 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HcrtO55241 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Mir2861-201ENSMUST00000175539 82 ntBASIC17.75■□□□□ 0.43
HcrtO55241 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.75■□□□□ 0.43
HcrtO55241 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HcrtO55241 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.74■□□□□ 0.43
HcrtO55241 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.74■□□□□ 0.43
HcrtO55241 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.74■□□□□ 0.43
HcrtO55241 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HcrtO55241 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
HcrtO55241 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms