Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
SncaO55042 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SncaO55042 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SncaO55042 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SncaO55042 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.78□□□□□ -0.04
SncaO55042 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SncaO55042 Gm13534-201ENSMUST00000121169 513 ntBASIC14.78□□□□□ -0.04
SncaO55042 Gm42778-201ENSMUST00000199644 553 ntBASIC14.78□□□□□ -0.04
SncaO55042 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SncaO55042 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SncaO55042 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SncaO55042 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SncaO55042 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.77□□□□□ -0.04
SncaO55042 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SncaO55042 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SncaO55042 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SncaO55042 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SncaO55042 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SncaO55042 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SncaO55042 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SncaO55042 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.76□□□□□ -0.05
SncaO55042 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.76□□□□□ -0.05
SncaO55042 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SncaO55042 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
SncaO55042 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SncaO55042 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SncaO55042 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SncaO55042 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.75□□□□□ -0.05
SncaO55042 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SncaO55042 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SncaO55042 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SncaO55042 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 Tgds-204ENSMUST00000228543 1594 ntBASIC14.73□□□□□ -0.05
SncaO55042 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SncaO55042 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SncaO55042 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.73□□□□□ -0.05
SncaO55042 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SncaO55042 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms