Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Per2O54943 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
Per2O54943 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Per2O54943 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Per2O54943 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Per2O54943 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Per2O54943 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Per2O54943 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Per2O54943 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per2O54943 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Per2O54943 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Per2O54943 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per2O54943 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Per2O54943 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Per2O54943 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Per2O54943 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.58■□□□□ 0.56
Per2O54943 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Per2O54943 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per2O54943 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.58■□□□□ 0.56
Per2O54943 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Per2O54943 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Per2O54943 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Gm38285-201ENSMUST00000192928 922 ntBASIC18.57■□□□□ 0.56
Per2O54943 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.57■□□□□ 0.56
Per2O54943 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.57■□□□□ 0.56
Per2O54943 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Per2O54943 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Per2O54943 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Per2O54943 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Per2O54943 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.56■□□□□ 0.56
Per2O54943 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.56■□□□□ 0.56
Per2O54943 Gm5408-201ENSMUST00000197998 747 ntBASIC18.56■□□□□ 0.56
Per2O54943 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.56■□□□□ 0.56
Per2O54943 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.56■□□□□ 0.56
Per2O54943 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Per2O54943 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per2O54943 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Per2O54943 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Flg-201ENSMUST00000050758 1488 ntBASIC18.55■□□□□ 0.56
Per2O54943 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.55■□□□□ 0.56
Per2O54943 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
Per2O54943 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per2O54943 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Per2O54943 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.54■□□□□ 0.56
Per2O54943 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Per2O54943 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Per2O54943 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.54■□□□□ 0.56
Per2O54943 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per2O54943 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Per2O54943 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.53■□□□□ 0.56
Per2O54943 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Per2O54943 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Per2O54943 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms