Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lsm2O35900 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lsm2O35900 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.9■□□□□ 0.14
Lsm2O35900 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.9■□□□□ 0.14
Lsm2O35900 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.9■□□□□ 0.14
Lsm2O35900 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Lsm2O35900 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lsm2O35900 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lsm2O35900 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm2O35900 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Lsm2O35900 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Lsm2O35900 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Lsm2O35900 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Gm22325-201ENSMUST00000158904 308 ntBASIC15.89■□□□□ 0.13
Lsm2O35900 Gm8493-201ENSMUST00000196881 489 ntBASIC15.89■□□□□ 0.13
Lsm2O35900 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Lsm2O35900 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm2O35900 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Lsm2O35900 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lsm2O35900 Gm13146-201ENSMUST00000118508 780 ntBASIC15.88■□□□□ 0.13
Lsm2O35900 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.88■□□□□ 0.13
Lsm2O35900 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.88■□□□□ 0.13
Lsm2O35900 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Lsm2O35900 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm2O35900 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.87■□□□□ 0.13
Lsm2O35900 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm2O35900 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.87■□□□□ 0.13
Lsm2O35900 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.87■□□□□ 0.13
Lsm2O35900 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.87■□□□□ 0.13
Lsm2O35900 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.87■□□□□ 0.13
Lsm2O35900 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Lsm2O35900 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.87■□□□□ 0.13
Lsm2O35900 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm2O35900 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Lsm2O35900 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Lsm2O35900 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.86■□□□□ 0.13
Lsm2O35900 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Lsm2O35900 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Gm13534-201ENSMUST00000121169 513 ntBASIC15.86■□□□□ 0.13
Lsm2O35900 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lsm2O35900 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Lsm2O35900 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms