Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Matn3O35701 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Matn3O35701 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Matn3O35701 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Matn3O35701 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
Matn3O35701 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Matn3O35701 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.17■□□□□ 0.18
Matn3O35701 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.17■□□□□ 0.18
Matn3O35701 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Matn3O35701 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Matn3O35701 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.17■□□□□ 0.18
Matn3O35701 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.17■□□□□ 0.18
Matn3O35701 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Dancr-204ENSMUST00000132389 2347 ntBASIC16.17■□□□□ 0.18
Matn3O35701 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn3O35701 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Matn3O35701 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.16■□□□□ 0.18
Matn3O35701 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.16■□□□□ 0.18
Matn3O35701 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Matn3O35701 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn3O35701 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.15■□□□□ 0.18
Matn3O35701 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn3O35701 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Matn3O35701 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.14■□□□□ 0.18
Matn3O35701 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.14■□□□□ 0.17
Matn3O35701 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Matn3O35701 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.14■□□□□ 0.17
Matn3O35701 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Matn3O35701 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn3O35701 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.13■□□□□ 0.17
Matn3O35701 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Matn3O35701 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Matn3O35701 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.13■□□□□ 0.17
Matn3O35701 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Matn3O35701 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Matn3O35701 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn3O35701 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.12■□□□□ 0.17
Matn3O35701 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn3O35701 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms