Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Phox2bO35690 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Phox2bO35690 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Phox2bO35690 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Phox2bO35690 Gm2274-201ENSMUST00000184539 609 ntBASIC17.8■□□□□ 0.44
Phox2bO35690 Gm37935-201ENSMUST00000192012 982 ntBASIC17.8■□□□□ 0.44
Phox2bO35690 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Phox2bO35690 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Phox2bO35690 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Phox2bO35690 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Phox2bO35690 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Gm27463-201ENSMUST00000183569 57 ntBASIC17.79■□□□□ 0.44
Phox2bO35690 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.79■□□□□ 0.44
Phox2bO35690 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Phox2bO35690 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Phox2bO35690 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Phox2bO35690 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Phox2bO35690 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Phox2bO35690 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.78■□□□□ 0.44
Phox2bO35690 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.78■□□□□ 0.44
Phox2bO35690 Gm18115-201ENSMUST00000221209 621 ntBASIC17.78■□□□□ 0.44
Phox2bO35690 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Phox2bO35690 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phox2bO35690 Golph3-205ENSMUST00000228671 2842 ntBASIC17.78■□□□□ 0.44
Phox2bO35690 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.78■□□□□ 0.44
Phox2bO35690 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Phox2bO35690 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.77■□□□□ 0.44
Phox2bO35690 Gm29518-201ENSMUST00000190858 372 ntBASIC17.77■□□□□ 0.44
Phox2bO35690 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.77■□□□□ 0.44
Phox2bO35690 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.77■□□□□ 0.44
Phox2bO35690 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phox2bO35690 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Phox2bO35690 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.77■□□□□ 0.43
Phox2bO35690 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 Gm12085-201ENSMUST00000119263 940 ntBASIC17.76■□□□□ 0.43
Phox2bO35690 Gm7063-201ENSMUST00000186840 981 ntBASIC17.76■□□□□ 0.43
Phox2bO35690 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.76■□□□□ 0.43
Phox2bO35690 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.76■□□□□ 0.43
Phox2bO35690 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 Zfp783-201ENSMUST00000095946 670 ntBASIC17.76■□□□□ 0.43
Phox2bO35690 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.76■□□□□ 0.43
Phox2bO35690 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phox2bO35690 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.75■□□□□ 0.43
Phox2bO35690 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phox2bO35690 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Phox2bO35690 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Phox2bO35690 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms