Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Abca4O35600 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Abca4O35600 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.79■□□□□ 0.28
Abca4O35600 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Abca4O35600 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
Abca4O35600 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Abca4O35600 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.78■□□□□ 0.28
Abca4O35600 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Abca4O35600 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Abca4O35600 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca4O35600 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.77■□□□□ 0.28
Abca4O35600 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Abca4O35600 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.77■□□□□ 0.28
Abca4O35600 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Abca4O35600 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abca4O35600 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abca4O35600 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Abca4O35600 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.76■□□□□ 0.27
Abca4O35600 Gm10175-201ENSMUST00000086013 645 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Gm12350-201ENSMUST00000121208 462 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.76■□□□□ 0.27
Abca4O35600 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca4O35600 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca4O35600 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Abca4O35600 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abca4O35600 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.75■□□□□ 0.27
Abca4O35600 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Abca4O35600 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.75■□□□□ 0.27
Abca4O35600 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Abca4O35600 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca4O35600 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.75■□□□□ 0.27
Abca4O35600 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.75■□□□□ 0.27
Abca4O35600 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.75■□□□□ 0.27
Abca4O35600 Gm8097-201ENSMUST00000117903 829 ntBASIC16.74■□□□□ 0.27
Abca4O35600 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.74■□□□□ 0.27
Abca4O35600 Gm10052-201ENSMUST00000168019 960 ntBASIC16.74■□□□□ 0.27
Abca4O35600 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.74■□□□□ 0.27
Abca4O35600 Gm7729-201ENSMUST00000050143 801 ntBASIC16.74■□□□□ 0.27
Abca4O35600 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abca4O35600 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Abca4O35600 Actl10-202ENSMUST00000226583 1501 ntBASIC16.74■□□□□ 0.27
Abca4O35600 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Abca4O35600 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Abca4O35600 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abca4O35600 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.74■□□□□ 0.27
Abca4O35600 Gm6376-201ENSMUST00000209407 580 ntBASIC16.74■□□□□ 0.27
Abca4O35600 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Abca4O35600 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Abca4O35600 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.73■□□□□ 0.27
Abca4O35600 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.73■□□□□ 0.27
Abca4O35600 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Abca4O35600 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.73■□□□□ 0.27
Abca4O35600 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca4O35600 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Abca4O35600 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Abca4O35600 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms