Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.08■□□□□ 0.81
Stx1aO35526 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Stx1aO35526 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Stx1aO35526 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Stx1aO35526 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Stx1aO35526 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.07■□□□□ 0.8
Stx1aO35526 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.07■□□□□ 0.8
Stx1aO35526 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.07■□□□□ 0.8
Stx1aO35526 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Stx1aO35526 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Stx1aO35526 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Stx1aO35526 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Stx1aO35526 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.06■□□□□ 0.8
Stx1aO35526 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.06■□□□□ 0.8
Stx1aO35526 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.06■□□□□ 0.8
Stx1aO35526 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.06■□□□□ 0.8
Stx1aO35526 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stx1aO35526 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.06■□□□□ 0.8
Stx1aO35526 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Stx1aO35526 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Stx1aO35526 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Stx1aO35526 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Gm13234-201ENSMUST00000120010 747 ntBASIC20.05■□□□□ 0.8
Stx1aO35526 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.05■□□□□ 0.8
Stx1aO35526 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stx1aO35526 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Stx1aO35526 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Stx1aO35526 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
Stx1aO35526 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.04■□□□□ 0.8
Stx1aO35526 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stx1aO35526 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.04■□□□□ 0.8
Stx1aO35526 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.04■□□□□ 0.8
Stx1aO35526 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Stx1aO35526 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.03■□□□□ 0.8
Stx1aO35526 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Stx1aO35526 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Stx1aO35526 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.03■□□□□ 0.8
Stx1aO35526 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stx1aO35526 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.02■□□□□ 0.8
Stx1aO35526 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Stx1aO35526 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.02■□□□□ 0.8
Stx1aO35526 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Stx1aO35526 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.02■□□□□ 0.8
Stx1aO35526 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stx1aO35526 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.02■□□□□ 0.8
Stx1aO35526 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms