Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Efnb3O35393 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Efnb3O35393 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Efnb3O35393 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.1□□□□□ -0.15
Efnb3O35393 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Efnb3O35393 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.1□□□□□ -0.15
Efnb3O35393 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Efnb3O35393 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Efnb3O35393 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.1□□□□□ -0.15
Efnb3O35393 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.1□□□□□ -0.15
Efnb3O35393 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.09□□□□□ -0.15
Efnb3O35393 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Efnb3O35393 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Efnb3O35393 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Efnb3O35393 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.09□□□□□ -0.15
Efnb3O35393 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.09□□□□□ -0.15
Efnb3O35393 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Efnb3O35393 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Efnb3O35393 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Efnb3O35393 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Efnb3O35393 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Efnb3O35393 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Efnb3O35393 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.08□□□□□ -0.16
Efnb3O35393 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.08□□□□□ -0.16
Efnb3O35393 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.08□□□□□ -0.16
Efnb3O35393 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Efnb3O35393 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Efnb3O35393 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Efnb3O35393 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Efnb3O35393 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Efnb3O35393 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Efnb3O35393 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.07□□□□□ -0.16
Efnb3O35393 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Efnb3O35393 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Efnb3O35393 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.06□□□□□ -0.16
Efnb3O35393 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.06□□□□□ -0.16
Efnb3O35393 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.06□□□□□ -0.16
Efnb3O35393 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.06□□□□□ -0.16
Efnb3O35393 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Gm40848-201ENSMUST00000221998 324 ntBASIC14.06□□□□□ -0.16
Efnb3O35393 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Efnb3O35393 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Efnb3O35393 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Efnb3O35393 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms